PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bHLH

Protein Properties

Length: 329aa MW: 36512.5 Da PI: 7.7553

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KHM99708.1	genome	TCUHK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.2	4.7e-11	57	105	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ + rE+ RRdr+N+ f+eL l ++ +K++Ka+iL+++v+ +k+L KHM99708.1 57 KVLKADREKLRRDRLNEHFQELGNALDPD----RPKNDKATILTETVQMLKDL 105 566789******************997....79**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.09E-13	53	125	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	13.427	55	105	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	5.20E-9	56	109	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.9E-12	56	128	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	7.7E-9	57	105	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.3E-7	61	111	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence Send to blast
MDQRKLRDSS NSKPASDAAP QHVTLTSNRF RNSQAAVRER EKEKGEGENE DPSAARKVLK 60 ADREKLRRDR LNEHFQELGN ALDPDRPKND KATILTETVQ MLKDLTAEVN RLKTEHKTLS 120 EESRELMQEK NELREEKTSL KSDIENLNVQ YQQRVRIMFP WSAIDPSAVI SQPYSYPVPI 180 HIPSAPISIH PSLQPFPFFG NQNPGHIPNP CSMYVPYTTP TSHPPVEPPS MMYASTSHAS 240 NQKESGSKSP GHRRSSGAER SSETDDVVTE LELKMPGSSS TQQGCTSGGR KGKMKDRTII 300 GGSASSQYSS SLGLQDSSNS VGDIPKTDN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KHM99708.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT031110	0.0	KT031110.1 Glycine max clone HN_CCL_213 bHLH transcription factor (Glyma07g26910.1) mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003529225.1	0.0	transcription factor bHLH121 isoform X1
Refseq	XP_028240745.1	0.0	transcription factor bHLH121-like isoform X1
Swissprot	Q9LT23	2e-71	BH121_ARATH; Transcription factor bHLH121
TrEMBL	A0A0B2NWS0	0.0	A0A0B2NWS0_GLYSO; Transcription factor bHLH121
TrEMBL	I1KKW8	0.0	I1KKW8_SOYBN; BHLH transcription factor
STRING	GLYMA07G26910.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2282	33	76

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.1	8e-66	bHLH family protein

Publications ? help Back to Top
Qi X, et al. Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing. Nat Commun, 2014. 5: p. 4340 [PMID:25004933] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Min JH, et al. Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element. Front Plant Sci, 2017. 8: p. 2100 [PMID:29321786]