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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
KHM99486.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
GRAS |
| Protein Properties |
Length: 545aa MW: 61279.3 Da PI: 5.0928 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KHM99486.1 | genome | TCUHK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 426 | 3.1e-130 | 176 | 545 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
+e L+ cA+a++ +d+e +++l+++l++++s +g+p+qRl ay++e ar+ s+s++yk+l++se + e l+++++++e++P++kf+++ aN
KHM99486.1 176 KEMLYMCAKAMAVNDMETTDWLVSELRKMVSISGNPIQRLGAYILESFVARIGASGSTIYKSLKCSEPT---GNELLSYMNVLYEICPYFKFGYMSANG 271
789*****************************************************************9...99************************* PP
GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
aI ea+ +e++vHi+Df+i+qG+QW++L+qaLa Rp gpp++Ri gv+++ s ++ l +g+rL+ +A++++vpfefn+ v +++++le+L+++
KHM99486.1 272 AIAEALREESEVHIVDFQIGQGTQWVSLIQALARRPVGPPKIRISGVDDSYSAyaRRGGLDIVGKRLSALAQSCHVPFEFNA-VRVPVTEVQLEDLELR 369
*************************************************877799999************************.7999************ PP
GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
p Ea+aVn++++lh+++desv+++++rd++L+l k+lsPkvv++veqe ++n+++Fl+rf+e+++yy a+f+s+++ lpre++eri+vE+++l+re+vn
KHM99486.1 370 PYEAVAVNFAISLHHVPDESVNSHNHRDRLLRLAKQLSPKVVTLVEQEFSTNNAPFLQRFVETMNYYLAVFESIDTVLPREHKERINVEQHCLAREVVN 468
*************************************************************************************************** PP
GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
++aceg+er+erhe l+kWr+r+++aGF+p+pls+ +++++k ll+ ++++ y++ee++g+l+lgW+++ Lv+ +aWr
KHM99486.1 469 LIACEGEERVERHELLNKWRMRFTKAGFTPYPLSSVINSSIKDLLQSYHGH-YTLEERDGALFLGWMNQVLVASCAWR 545
*************************************************77.*************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 545 aa
Download sequence Send
to blast |
MQTPQNHKIS YGSGGFYVEP VQNLDSYCIP SSENIDNYSS SDNSSQTTYP SVQTLEQYCT 60
LESASTGNSF PSQNSPPALS FSSNNSLLSK LESNSYVLRP QHSLEIASGS PEDDSYLTHD 120
LDGLTHKIRE LETAMLGPNA DMLDIYGTVI PEPDSFLLEA EKWKKMMEIS CRGDLKEMLY 180
MCAKAMAVND METTDWLVSE LRKMVSISGN PIQRLGAYIL ESFVARIGAS GSTIYKSLKC 240
SEPTGNELLS YMNVLYEICP YFKFGYMSAN GAIAEALREE SEVHIVDFQI GQGTQWVSLI 300
QALARRPVGP PKIRISGVDD SYSAYARRGG LDIVGKRLSA LAQSCHVPFE FNAVRVPVTE 360
VQLEDLELRP YEAVAVNFAI SLHHVPDESV NSHNHRDRLL RLAKQLSPKV VTLVEQEFST 420
NNAPFLQRFV ETMNYYLAVF ESIDTVLPRE HKERINVEQH CLAREVVNLI ACEGEERVER 480
HELLNKWRMR FTKAGFTPYP LSSVINSSIK DLLQSYHGHY TLEERDGALF LGWMNQVLVA 540
SCAWR
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |
