PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHM99380.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family BES1
Protein Properties Length: 658aa    MW: 73845.5 Da    PI: 6.7487
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHM99380.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822146.42.5e-45341731133
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl...eeaeaagssasaspess 93 
                 gg++r+++ +E+E++k+RERrRRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++   + +kp    ++  +  ss+ as++++
  KHM99380.1  34 GGTRRSRPLEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPsrsQVQKPAggnSTIVTSSSSHAASQQTP 132
                 5899*****************************************************************965556666674333344445555888888 PP

      DUF822  94 lq.sslkssalaspvesysaspksssfpspssldsislasa 133
                 +  ++ ++s  +sp+e  ++++ks+ +p ps +   s++ +
  KHM99380.1 133 SAsLRGVASGYRSPLEYNACQTKSVFMPTPSPYGLSSSSRS 173
                 77788999**********************99877766543 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.1E-4135178IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514451.93E-178217654IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.804.8E-194218652IPR013781Glycoside hydrolase, catalytic domain
PfamPF013731.1E-100224643IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.1E-65255269IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.1E-65276294IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.1E-65298319IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.4E-6381390IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007504.1E-65391413IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.1E-65464483IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.1E-65498514IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.1E-65515526IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.1E-65533556IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.1E-65573595IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.4E-6624638IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008421.4E-6639653IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 658 aa     Download sequence    Send to blast
MVEIDGGNGI GTATDDNRFQ QHQQFQEQVG TPGGGTRRSR PLEEKERTKL RERRRRAITA  60
RILAGLRRHG NYNLRVRADI NDVIAALARE AGWVVLPDGT TFPSRSQVQK PAGGNSTIVT  120
SSSSHAASQQ TPSASLRGVA SGYRSPLEYN ACQTKSVFMP TPSPYGLSSS SRSQTSMVGD  180
GEAQRDNRPL IGGSMDNADD KQIADLPPRL PERDLAGTPY VLVYVMLSLG VINIKCELVD  240
PDGLLKQLKV LKSVHVDGVM VDCWWGIVEA HAPQEYNWNG YKRLFQMVRE LKLKLQVVMS  300
FHECGGNFGD DVCIPLPHWV AEIGRSNPDI FFTDREGRHN PECLSWGIDK ERVLRGRTAL  360
EVYFDFMRSF RVEFDEYFED GLISMIEVGL GPCGELRYPS CPVKHGWRYP GIGEFQCYDQ  420
YMLKSLRKAA EVRGHAIWAR GPDNAGTYNS QPHETGFFCD GGDYDGFYGR FFLSWYSQVL  480
VDHGNRVLSL AKLAFEGSCI AAKLSGIYWW YKTASHAAEL TAGYYNPCNR DGYAAIMTML  540
KTNGINLNIP CVDLHTLNQH EGFPETFADP EGLVWQVLNA GWEVDLPVTS QNGFPCLNRV  600
GYNKVLDNAK PMNDPDGRHF SSFTYLRLSS LLMERQNFIE FERFVKRMHG EAVLDLQV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1v3i_A1e-14522065111444Beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHM99380.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003552392.10.0beta-amylase 7
RefseqXP_014626460.10.0beta-amylase 7
RefseqXP_028214294.10.0beta-amylase 7-like
RefseqXP_028214295.10.0beta-amylase 7-like
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A0B2NQM40.0A0A0B2NQM4_GLYSO; Beta-amylase
STRINGGLYMA18G46630.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108833339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]
  2. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]