 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KFK44530.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
|
| Family |
bHLH |
| Protein Properties |
Length: 224aa MW: 25355.5 Da PI: 6.522 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KFK44530.1 | genome | MPIPBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 29.3 | 1.6e-09 | 115 | 162 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++iN+++ L++l+P + k + a +L ++Y++sLq
KFK44530.1 115 SHSLAERVRREKINDRLRSLQDLVPGC----YKAMGMAVMLDVIIDYVRSLQ 162
8*************************8....345888999999999999998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:2000488 | Biological Process | positive regulation of brassinosteroid biosynthetic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 224 aa
Download sequence Send
to blast |
MARFEPYKYN VDLNPLLAQF NQNPELINLD LPGSTPSSFM LFSNGALVDS HHNSSHFSPN 60
LLHGDSGRKG KREESGSKRK RKRLDEEEAM NIEDGIQKTR DVVHVRAKRG QATDSHSLAE 120
RVRREKINDR LRSLQDLVPG CYKAMGMAVM LDVIIDYVRS LQNQIEFLSM KLSAASAYYD 180
LNSLDIEPTD MFQGGNTYSA EEMERILRES VGTQPPNFSS TFPI
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 67 | 83 | RKGKREESGSKRKRKRL |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK175757 | 0.0 | AK175757.1 Arabidopsis thaliana mRNA for putative bHLH transcription factor (bHLH075), complete cds, clone: RAFL22-31-M12. |
| GenBank | AY088885 | 0.0 | AY088885.1 Arabidopsis thaliana clone 98716 mRNA, complete sequence. |
| GenBank | DQ446289 | 0.0 | DQ446289.1 Arabidopsis thaliana clone pENTR221-At1g25330 basic helix-loop-helix family protein (At1g25330) mRNA, complete cds. |
