 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KFK43691.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
|
| Family |
BBR-BPC |
| Protein Properties |
Length: 272aa MW: 30378.7 Da PI: 10.195 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KFK43691.1 | genome | MPIPBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 337 | 4.8e-103 | 1 | 272 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepa..aslkenlglqlmssiaerdaki....rernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvenslas 93
mdddg+ rn+gyyepa +++k nlglqlms+i +r++k+ r+ nl ++++ ++ + m++ +++++ +++k++++l+v+ns
KFK43691.1 1 MDDDGF--RNWGYYEPAaaTTFKGNLGLQLMSTI-DRNTKPflpgRDPNL-MIGSYHPDPPVHMSY----NWINQ-------QKDKFFNMLPVTNS--- 81
99**99..9******99889**************.9**************.999999999999***....*****.......899*******9997... PP
GAGA_bind 94 alpvgvqvlsgtksidslqq.lse..pqledsavelreeeklealpieeaaeeak.ekkkkkkrqrakkpkekkakkkkkksekskkkvkkesadersk 188
p++ +vl++t+s+ ++ + l++ +q+e+++v+ +++e +k+k+++++ ++ +k+kk +k+k+++ ++++++ +r+k
KFK43691.1 82 --PNYGNVLPETSSAPTMPMnLHHhhHQTEENQVK-------------CEEEILLpKKRKPNSKAGSTPTKAKKPRKPKDEN----SNSTTNV--SRVK 159
..99**************99422212333333333.............2222222023333334445556777777888833....3333333..689* PP
GAGA_bind 189 aekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkd 287
kks+dlv+ngvs+D+s++PvP+C+CtGa++qCY+WG+GGWqSaCCtt+iS++PLP+stkrrgaRi+grKmSqgafkk+LekLa++G++++np+DLk+
KFK43691.1 160 PAKKSVDLVINGVSMDISGIPVPICTCTGAPQQCYRWGCGGWQSACCTTNISMHPLPMSTKRRGARISGRKMSQGAFKKVLEKLASDGFNFGNPIDLKS 258
*************************************************************************************************** PP
GAGA_bind 288 hWAkHGtnkfvtir 301
hWA+HGtnkfvtir
KFK43691.1 259 HWARHGTNKFVTIR 272
*************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0050793 | Biological Process | regulation of developmental process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MDDDGFRNWG YYEPAAATTF KGNLGLQLMS TIDRNTKPFL PGRDPNLMIG SYHPDPPVHM 60
SYNWINQQKD KFFNMLPVTN SPNYGNVLPE TSSAPTMPMN LHHHHHQTEE NQVKCEEEIL 120
LPKKRKPNSK AGSTPTKAKK PRKPKDENSN STTNVSRVKP AKKSVDLVIN GVSMDISGIP 180
VPICTCTGAP QQCYRWGCGG WQSACCTTNI SMHPLPMSTK RRGARISGRK MSQGAFKKVL 240
EKLASDGFNF GNPIDLKSHW ARHGTNKFVT IR
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000269|PubMed:14731261}. |
