 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KFK39876.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
|
| Family |
WRKY |
| Protein Properties |
Length: 351aa MW: 39114 Da PI: 7.1682 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KFK39876.1 | genome | MPIPBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 104.3 | 6.7e-33 | 178 | 236 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+s++prsYYrCt+ gC vkk+vers +dp++v +tYeg+H h+
KFK39876.1 178 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSYDDPSIVMTTYEGQHSHP 236
59********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010200 | Biological Process | response to chitin |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MANLVTSSDH HHSQLELAGN NNMNLSSIFD TSITLPFPYS YFEYHSSTNP NSFIDLLRQD 60
PQFPSSSNPS SFSFDAFPLP NNNNPFFTDL PLPHPATTTK AESSEVVNTT PTSPNSTSVS 120
SSSNEAANDT TNKEASVKIQ EEHEQKGTKP ELKAKKKNQK KAREPRFAFL TKSDIDNLDD 180
GYRWRKYGQK AVKNSPYPRS YYRCTTVGCG VKKRVERSYD DPSIVMTTYE GQHSHPFPMT 240
PRGHMGMLTS PILDHGATST SSSSFSIPQP RYLMSQDHQP YNNSLSMINR SSSDGNFVNP 300
GFPGFAYDMS QASTSTSSSI RDHGLLQDIL PSQIRPDTIN NAQTKEQDDK K
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KF430059 | 0.0 | KF430059.1 Brassica rapa WRKY transcription factor 48 (WRKY48) mRNA, complete cds. |
