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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KFK39215.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
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Family |
M-type_MADS |
Protein Properties |
Length: 378aa MW: 43041.1 Da PI: 9.5074 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KFK39215.1 | genome | MPIPBR | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 64.9 | 8.7e-21 | 16 | 60 | 6 | 50 |
HHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 6 ksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+s ++ +++kR +++KKA+ELS+LC++ev+vi ++s+gkl++++
KFK39215.1 16 SSTKTSSLAKREDTVFKKANELSILCGIEVCVIFYGSNGKLRTWP 60
5677889*************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 378 aa
Download sequence Send
to blast |
MASSSSSTSA TKKKASSTKT SSLAKREDTV FKKANELSIL CGIEVCVIFY GSNGKLRTWP 60 ENREEVQKIA RRYSELSLTK RRKGSVDLVE FLEKINSDDS KDKKKKRKVM RVASSNHKFS 120 DWDPRFDSYS VEQLTELYHT LESKQTILQH RFQAVVEAQK QRMMQNTNYM AVQEQRMMTL 180 TVSTMNHLQQ HPNNVSMYPF NHGNGTFSHM PVQAPAFNQA PDFTQAPAFN QGQSLAPLPN 240 SLTIYQNPTA ENYSMLLGPQ ETPFQNMNMN MLTYNNNVND LSRQVYQNCK VDNYPGKLGV 300 QDTGMNQFQN PNMQSYNNFD VESYLRSHGI QDTGINGLQN MYGYNNNGNT NGLSHQFAQF 360 PNQRAGPAFQ FGSSHTQY
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 102 | 107 | KKKKRK |
2 | 103 | 108 | KKKRKV |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |