 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
KFK37614.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 265aa MW: 30350.4 Da PI: 4.4643 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KFK37614.1 | genome | MPIPBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 64.2 | 1.8e-20 | 65 | 118 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t+eq++ Le+ Fe ++++ e++++LAkklgL+ rqV vWFqNrRa++k
KFK37614.1 65 KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 118
56789************************************************9 PP
|
| 2 | HD-ZIP_I/II | 134.6 | 3.4e-43 | 64 | 156 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrl++eqv+lLE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l ++ +++ k++++Lr+e+++
KFK37614.1 64 EKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVKDNDKLRSEVTS 156
69**************************************************************************************99975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001558 | Biological Process | regulation of cell growth |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009965 | Biological Process | leaf morphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MESNSFFFDP SSASNGNMFF LGNLNPVVQA RSMMNIEETS KRRPFFSSPE DLYDEEYYDE 60
QTPEKKRRLT TEQVHLLEKS FETENKLEPE RKTQLAKKLG LQPRQVAVWF QNRRARWKTK 120
QLERDYDLLK STYDQLLSNY DSIVKDNDKL RSEVTSLTEK LQAKEEETAN EPPAQVPQPN 180
QQLEPAIKTE DRLSSGSVGS AVLDEDAPQL LDSCDSYFPS IVPIHSDEDN NNNNGSAIDC 240
YADVFVPTTS PPHNHGESLG FWGWS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 112 | 120 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription activator involved in leaf development. Binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:8535134}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY058188 | 1e-169 | AY058188.1 Arabidopsis thaliana AT3g01470/F4P13_2 mRNA, complete cds. |
| GenBank | AY098972 | 1e-169 | AY098972.1 Arabidopsis thaliana AT3g01470/F4P13_2 mRNA, complete cds. |
| GenBank | X58821 | 1e-169 | X58821.1 A.thaliana homeobox gene Athb-1 mRNA. |
