PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK36349.1
Organism
Arabis alpina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family GeBP
Protein Properties Length: 733aa    MW: 84689.7 Da    PI: 4.3876
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK36349.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573102.53.7e-3244139398
      DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 ++++w+ + e+++L G++d++++++ s+ dd+da+y+f+k+si++k+sk+ql++Kir LKk+f +++ k+++gk psf++++d++if+ls++iWg+
  KFK36349.1  44 SKMIWTRNNELIILAGIVDYESEKELSYNDDWDALYNFIKGSIELKFSKKQLIDKIRGLKKRFMDNMVKSEDGKGPSFTNTEDDEIFKLSMIIWGT 139
                 789*******************************************************************************************95 PP
2DUF57384.11.9e-26429518498
      DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 +  w+++De  +L+G+++++++t+  + +d+daf+ f+k+si   ++k+ql +Kir+LKk+f+++ +k      psf++++d+++f+ls+ iWg+
  KFK36349.1 429 KITWTKDDEHHILKGIVKYEDETELRYRADWDAFCAFIKDSIVTIFTKEQLQSKIRKLKKRFTDNLAK-----GPSFTNSDDEEMFKLSMVIWGK 518
                 557****************************************************************9.....89******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.7E-2545138IPR007592Protein of unknown function DUF573
PfamPF045045.4E-21431517IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 733 aa     Download sequence    Send to blast
MPLSSPIKRK HVDDDNEEVS GTKSRLRSRK ILKTTFLSPS SSSSKMIWTR NNELIILAGI  60
VDYESEKELS YNDDWDALYN FIKGSIELKF SKKQLIDKIR GLKKRFMDNM VKSEDGKGPS  120
FTNTEDDEIF KLSMIIWGTK SEKEFGSNEN LEQGKDVTNA DHEKINENMD QAKDVDVPYA  180
EHERISENVD QAKVDVSDAE NERVNENMDI AKKDVSCAEH DQVNESVGQA KVNKDVSYAD  240
HDQVNESMDQ AKEDVSSEEQ ERVNESVDQA KTDVEHERVS NISMEIDDDG EKEKKSKEDG  300
VDEFCALQDA FEALLFPRFG KTHQKLLLHN LKNLKAEKRR ELSDEWKALL AEEVQLHIKK  360
LTFSTKLANT LVSAQYRATA SSSQRTRKRV VVDEEDEEEV SDKETKLIRK RPRRTTTTTT  420
TLVTSPTPKI TWTKDDEHHI LKGIVKYEDE TELRYRADWD AFCAFIKDSI VTIFTKEQLQ  480
SKIRKLKKRF TDNLAKGPSF TNSDDEEMFK LSMVIWGKNN ETECDTNVNM DQSKDLALVE  540
NEQNNENVEH EQMMENDLAL VENEQNNENV EHEQMMENVE QGKEDLTNVE DEQITENVAQ  600
EEDATYVEDE HITENMAQEE DLTNVEQDQR NVNVEQAEDA THVEREQINE NVEQVMVDDG  660
EKVGEEEFCL LQDAFEMTLF PKLDQAHQKL LLQNLRNMKA DKGKELCEEW NELLLEEIRF  720
NINKVTYAAK LSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1333339LKAEKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK36349.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A087H2J70.0A0A087H2J7_ARAAL; Uncharacterized protein
STRINGA0A087H2J50.0(Arabis alpina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36340.14e-60DNA-binding storekeeper protein-related transcriptional regulator