PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK35637.1
Organism
Arabis alpina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family G2-like
Protein Properties Length: 149aa    MW: 17362.4 Da    PI: 11.0223
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK35637.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like29.91.2e-091213555
     G2-like 35 lmkvkgLtlehvkSHLQkYRl 55
                +m+v+g++l+hvkSHLQk+Rl
  KFK35637.1  1 MMEVEGISLHHVKSHLQKFRL 21
                7*******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.0E-7121IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MMEVEGISLH HVKSHLQKFR LGKCNIRDKG NQYNKRLKTV RGIAKTCASR NLPRQQVNIR  60
PKVTGAVNAK KVKEIQGSLY MLIERDFHLQ RCREAQRMQM TSGIEKQHNM FEAQYLKART  120
NASITTHIVM QLFSIPYYHQ QSVLLIRAL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK35637.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024009285.12e-52uncharacterized protein LOC18014183
TrEMBLA0A087H0I51e-107A0A087H0I5_ARAAL; Uncharacterized protein
STRINGA0A087H0I51e-107(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM134061520
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G06020.14e-14G2-like family protein