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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KFK32082.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
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Family |
bHLH |
Protein Properties |
Length: 255aa MW: 28027.3 Da PI: 4.8289 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KFK32082.1 | genome | MPIPBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.5 | 9.8e-13 | 189 | 234 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++Er RR ri +++ +L+el+P+ +k + a++Le+AveY+k Lq
KFK32082.1 189 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKVLQ 234
689*********************7....688***************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MQSTSVGSSG GGSSGGGGGQ LSRSGLSRIR SAPATWLETL LEEDEEDSLK PNLGLTELLT 60 GNSSDIPTSR GSFEFPIPVE QGLYQQGGFH RQNSTPADFL SGADGFIPNY GIPANYEYMD 120 VSPGSKRSRE MEALFSSPDF TSQMKGEQSS GQVPAGASGM MDMNMDNLME DSVAFRVRAK 180 RGCATHPRSI AERVRRTRIS DRIRKLQELV PNMDKQTNTA DMLEEAVEYV KVLQRQIQEL 240 KEEQKRCTCM PKEEQ
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK230384 | 0.0 | AK230384.1 Arabidopsis thaliana mRNA for putative bHLH transcription factor, complete cds, clone: RAFL24-31-D13. |
GenBank | BT010423 | 0.0 | BT010423.1 Arabidopsis thaliana At4g09180 mRNA, complete cds. |