PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK30382.1
Organism
Arabis alpina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family bZIP
Protein Properties Length: 233aa    MW: 27011.2 Da    PI: 7.5104
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK30382.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.45.5e-12130176551
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                 ++ +r+++NRe+ArrsR RK+  i++L++ v +L+ eN++L ++l  
  KFK30382.1 130 RKRKRMESNRESARRSRIRKQSHIDNLRNQVNQLDLENRELNNRLRL 176
                 67899*********************************999977654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.0E-10122177No hitNo description
SMARTSM003386.8E-11126190IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.921128191IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-10130177No hitNo description
PfamPF001701.1E-9130175IPR004827Basic-leucine zipper domain
CDDcd147022.35E-17131182No hitNo description
PROSITE patternPS000360133148IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MLSTVPAFSF SEPGLVHQFS GFQTGFTPWE WDCSDLFSVN ELSPEPAVPS PCYGESDIGS  60
VKINSGFDDI KTGSDESCRG FIKTKGQPFS QANEPDSEDQ KHLTAIANFG TGEGNHDRNK  120
LSQPEITDER KRKRMESNRE SARRSRIRKQ SHIDNLRNQV NQLDLENREL NNRLRLVLCQ  180
LQRVNSDKNR LLTEQEILRL RLSEMRRILI IKQLQQQQQW QLHNQRMIMN EQN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142149RRSRIRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK30382.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006286269.21e-126bZIP transcription factor RISBZ4
RefseqXP_019087040.11e-125PREDICTED: basic leucine zipper 61-like
TrEMBLA0A087GKI01e-171A0A087GKI0_ARAAL; Uncharacterized protein
STRINGA0A087GKI01e-172(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM78551840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37730.11e-103basic leucine-zipper 7