PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis

Family

G2-like

Protein Properties

Length: 311aa MW: 35800.3 Da PI: 6.1057

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KFK30344.1	genome	MPIPBR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100	1.6e-31	182	236	2	56
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +r+rW++eLH++Fv+a+++LGGs++AtPk+i+elm+++gLt+++vkSHLQkYR++ KFK30344.1 182 QRRRWSQELHRKFVDALHKLGGSQVATPKQIRELMQIDGLTNDEVKSHLQKYRMH 236 8****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.585	178	238	IPR017930	Myb domain
SuperFamily	SSF46689	4.22E-18	179	239	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	2.4E-27	179	239	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.2E-25	182	236	IPR006447	Myb domain, plants
Pfam	PF00249	7.8E-9	183	234	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0010092	Biological Process	specification of organ identity
GO:0010629	Biological Process	negative regulation of gene expression
GO:0048449	Biological Process	floral organ formation
GO:0005634	Cellular Component	nucleus
GO:0005829	Cellular Component	cytosol
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence Send to blast
MGLNLNLSMY SLAKPLSQFL DEVSRIQDNH SKLFEIDGYV EKLEEEKKKI DVFKRELPLC 60 MLLITEAIEA LKEEGRRGVT NGKFDVGERA KSETDNKKNW MSSAQLWISN TNSTNEEEED 120 RSVMTTTQGG VFPSFYIPPP PPQALPPVPL SMMSQTSEMM IDQNHFNKAL QNHHHHSMKK 180 EQRRRWSQEL HRKFVDALHK LGGSQVATPK QIRELMQIDG LTNDEVKSHL QKYRMHIRKH 240 PPSDQPESQS LISLTRSDSP QSPLVERGLF GGHSSEEAEE EEEEEEEKSD GRSSWKNEVL 300 KKKRQGLDLE L

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	9e-13	183	234	4	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	9e-13	183	234	4	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	1e-12	183	234	3	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-12	183	234	3	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-12	183	234	3	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-12	183	234	3	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	9e-13	183	234	4	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	9e-13	183	234	4	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	9e-13	183	234	4	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	9e-13	183	234	4	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	9e-13	183	234	4	55	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	9e-13	183	234	4	55	Protein PHOSPHATE STARVATION RESPONSE 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional repressor that functions with ULT1 in a pathway which regulates floral meristem homeostasis and organ number in the flower. Binds specifically to the DNA sequence motif 5'-GTAGATTCCT-3' of WUS promoter, and may be involved in direct regulation of WUS expression. Binds specifically to the DNA sequence motif 5'-AAGAATCTTT-3' found in the promoters of AG and the NAC domain genes CUC1, CUC2 and CUC3, and may be involved in direct regulation of these gene expressions.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00475	DAP	Transfer from AT4G37180	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KFK30344.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK316664	2e-56	AK316664.1 Arabidopsis thaliana AT4G37180 mRNA, complete cds, clone: RAFL06-70-N17.
GenBank	ATU62741	2e-56	U62741.1 Arabidopsis thaliana putative cytoskeletal protein mRNA, complete cds.
GenBank	AY039841	2e-56	AY039841.1 Arabidopsis thaliana AT4g37180/C7A10_180 mRNA, partial cds.
GenBank	BT028985	2e-56	BT028985.1 Arabidopsis thaliana At4g37180 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_013617177.1	1e-141	PREDICTED: uncharacterized protein LOC106323631
Swissprot	F4JRB0	1e-134	HHO5_ARATH; Transcription factor HHO5
TrEMBL	A0A087GKE2	0.0	A0A087GKE2_ARAAL; Uncharacterized protein
STRING	A0A087GKE2	0.0	(Arabis alpina)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM4922	26	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	1e-132	G2-like family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098]