 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
KFK29179.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
|
| Family |
WRKY |
| Protein Properties |
Length: 549aa MW: 60517.3 Da PI: 7.2592 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KFK29179.1 | genome | MPIPBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.7 | 1.8e-31 | 201 | 258 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d+k+++i+Y+g+H+h+k
KFK29179.1 201 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGKITDIIYKGTHDHPK 258
8****************************************.***************85 PP
|
| 2 | WRKY | 106.8 | 1.1e-33 | 372 | 430 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
KFK29179.1 372 LDDGYRWRKYGQKVVRGNPNPRSYYKCTAAGCPVRKHVERASHDPKAVITTYEGKHNHD 430
59********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009611 | Biological Process | response to wounding |
| GO:0009961 | Biological Process | response to 1-aminocyclopropane-1-carboxylic acid |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 549 aa
Download sequence Send
to blast |
MNSEVNDGKE FQVDPTARHD SAGGGGSARY KLMSPAKLPI SRSTDITIPP GLSPTSFLES 60
PVFISNIKPE PSPTTGSLFK PRPVHISVSS TSYTGRAFHQ NTFTEQKSSE FEFRPPASNM 120
VYAELDKHRS EPPVQFQGHG SSHSLSSLSE AAASSSELSR PAPPLQTTPT SSDIPAGSDQ 180
DESVQTSQND SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS 240
HDGKITDIIY KGTHDHPKPQ PGRRNSGGLG MTSQEERLDK YPPLNGRDEK GSSVYNLSQA 300
VEQTGNPEGP PTSATDDGGE VAVSNRNKDD PDNDDPFTKR RRLEGTMDIT PLVKPIREPR 360
VVVQTLSEVD ILDDGYRWRK YGQKVVRGNP NPRSYYKCTA AGCPVRKHVE RASHDPKAVI 420
TTYEGKHNHD VPLSKSSSNH DNQPRFRQDE TDTISLNLGV GFSPDGPDHT SNEHQRQNQQ 480
LVNQSHPNGV GIRFVHATPM SSYYASLNSG MNQYGPRETQ NETQNGDISS LNHSSYPYPH 540
NIGRIQSGP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK352917 | 0.0 | AK352917.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-11-P10. |
