 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KFK29142.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 349aa MW: 39448.2 Da PI: 8.8584 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KFK29142.1 | genome | MPIPBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 55.3 | 1.1e-17 | 11 | 64 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++++eq+++Le Fe+++++ e++ ++A+++gL rqV vWFqNrRa+ k
KFK29142.1 11 KKRRLNAEQVKRLEGSFEEENKLEPERKVRIAEETGLHPRQVAVWFQNRRARGK 64
56689***********************************************88 PP
|
| 2 | HD-ZIP_I/II | 117.7 | 6.5e-38 | 10 | 99 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
ekkrrl++eqvk LE sFeee+kLeperKv++a+e gl+prqvavWFqnrRAR ktkqlE+dye+Lk++yd+lk + +L++e + L+++
KFK29142.1 10 EKKRRLNAEQVKRLEGSFEEENKLEPERKVRIAEETGLHPRQVAVWFQNRRARGKTKQLERDYEVLKAHYDSLKLDYGNLQHERQVLTSK 99
69***********************************************************************************99865 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0016021 | Cellular Component | integral component of membrane |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MEEDTFSLAE KKRRLNAEQV KRLEGSFEEE NKLEPERKVR IAEETGLHPR QVAVWFQNRR 60
ARGKTKQLER DYEVLKAHYD SLKLDYGNLQ HERQVLTSKE QSTSLTEQMV PTCHKGWCSS 120
SCSGSGLTAE PCRFGNYPHK EINMVELEEL RNLKSLEYDP HLQCISCLPV GMLTKAGASY 180
VVIVSSLTIS VAGLRWGGLD LSLASFADPD LMKIRSASLH RFSFTFYGGL VVVASDGSVS 240
LSGGDVSREL EPPDADDTGS ALFLGYAVMF FLSTTRLMAA VCTRTRSFLR GVEARPQRQQ 300
KPLCRRRHYS CVRSRVFFCL RFTSGLWVYP VRVFTKPGRV FGFNVACLF
|
