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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KFK28021.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
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Family |
Dof |
Protein Properties |
Length: 369aa MW: 39250.1 Da PI: 7.6719 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KFK28021.1 | genome | MPIPBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 123.7 | 6e-39 | 68 | 127 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++ +kcprC+s++tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk s
KFK28021.1 68 DHPQKCPRCESSHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPS 127
6789*****************************************************976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 369 aa
Download sequence Send
to blast |
MGLTSLQVCM DSDWLQEAES SGGSMLDSTS PSAADILAAC GTRPQASAVA VAAAALMDGG 60 RRLRPPHDHP QKCPRCESSH TKFCYYNNYS LSQPRYFCKT CRRYWTKGGT LRNIPVGGGC 120 RKNKKPSSSN SSSSTSSGKK PSNIVTTNTN DLMALAHSHQ NYQNASLGFS HFGGMMGSYS 180 TPEHSNVGFL ESKYGGLLSQ SPRPIDFLDS KFDLMGVNND NMVMVDHGSN GDHHHNHHMG 240 MNHGLGLNNN NNGGFHGISP GGNGNDGGGG FMDISTYQRL MLSNYNDHHH EDHQRVTTIM 300 DVKPNPKLLS LDWQQDQGYS DGNGNGGGGK SDGAGAGGYG GGGYINGLGS SWNGLMNGYG 360 SSTKANSLV
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Promotes expression (PubMed:19915089). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). Involved in the regulation of interfascicular cambium formation and vascular tissue development, particularly at a very early stage during inflorescence stem development; promotes both cambium activity and phloem specification, but prevents xylem specification (PubMed:19915089). {ECO:0000250|UniProtKB:Q9M2U1, ECO:0000269|PubMed:19915089, ECO:0000269|PubMed:30626969}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT020467 | 0.0 | BT020467.1 Arabidopsis thaliana At5g62940 gene, complete cds. |
GenBank | BT020576 | 0.0 | BT020576.1 Arabidopsis thaliana At5g62940 gene, complete cds. |