 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KFK27483.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
|
| Family |
G2-like |
| Protein Properties |
Length: 294aa MW: 32197.8 Da PI: 6.6352 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KFK27483.1 | genome | MPIPBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 92 | 5.1e-29 | 139 | 192 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+prl+Wtp+LH+rFve+v++L G+++A+Pkti++lm+v+gL++e+v+SHLQkYRl
KFK27483.1 139 RPRLVWTPKLHKRFVEVVAHL-GIKNAVPKTIMQLMNVEGLSRENVASHLQKYRL 192
59*******************.********************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009909 | Biological Process | regulation of flower development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MGEEVRMSEY GVDGEYSSDG EEDKVPEWEI GLPNGDDLTP LSQSLVPSIL AVAFMITPER 60
SRTVHDVNRA SKNTISSLRS NGSPGVANAS VAVEEEVNRV GSSSPESDLK KQKKSDGGGE 120
AEEGDSETED VSEKTTLKRP RLVWTPKLHK RFVEVVAHLG IKNAVPKTIM QLMNVEGLSR 180
ENVASHLQKY RLYLKRIHED PSSSDHLFSS TLVPPQNSFK DGGIGNRISI PVPSIPVYGQ 240
HMGTQGYHNG HNHHHKYHNH GNGVFESNQY TMQQSKFGSM VTSPSVGSGG VKDK
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that is a critical component of the regulatory circuit of the circadian clock. Binds to specific sites on CCA1 promoter leading to CCA1 activation. Is required for the rhythmic expression of other clock genes such as LHY, GI and APRR1/TOC1. {ECO:0000269|PubMed:21447790}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB025604 | 6e-72 | AB025604.1 Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F2O15. |
| GenBank | AB206577 | 6e-72 | AB206577.1 Arabidopsis thaliana PCLL gene for putative transcription factor, complete cds. |
| GenBank | AK117348 | 6e-72 | AK117348.1 Arabidopsis thaliana At5g59570 mRNA for ARR1 like protein, complete cds, clone: RAFL16-91-G07. |
| GenBank | AY088089 | 6e-72 | AY088089.1 Arabidopsis thaliana clone 41153 mRNA, complete sequence. |
| GenBank | BT026065 | 6e-72 | BT026065.1 Arabidopsis thaliana At5g59570 mRNA, complete cds. |
| GenBank | CP002688 | 6e-72 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
