 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
KFK26431.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
|
| Family |
MYB |
| Protein Properties |
Length: 351aa MW: 39532.3 Da PI: 8.0282 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KFK26431.1 | genome | MPIPBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 57.7 | 2.7e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl
KFK26431.1 14 KGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61
678*******************************************97 PP
|
| 2 | Myb_DNA-binding | 49.9 | 7.3e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++++E+ l++++++ lG++ W+ Ia +++ gRt++++k++w++
KFK26431.1 67 RGAFSQDEESLIIELHAALGNR-WSQIATRLP-GRTDNEIKNFWNS 110
89********************.*********.***********97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT RHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60
LRPDLKRGAF SQDEESLIIE LHAALGNRWS QIATRLPGRT DNEIKNFWNS CLKKKLRRKG 120
IDPTTHKPLI SELQSLNVID QKLTSSNTLE VVKSTGSMNP HDQSMVVSPQ SGPWWFPTTT 180
TANQNAAFCL STTTPTVSDQ IVSLISSVST MSSSPTPMTS NFNPVPNNWE VLNYCNTVPS 240
QANSIYSAFF GNQYTEASQI MNNNPVVDHH HPHNQDMKSW ASDILQYTEH NQSSETGLEA 300
EVKPDIAKYY WRSSSSSSPN QEAATLLHDA DVEVYGKNLQ KLNNIAFEQS L
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY099777 | 0.0 | AY099777.1 Arabidopsis thaliana transcription factor ATMYB4 (At5g26655) mRNA, complete cds. |
| GenBank | AY519629 | 0.0 | AY519629.1 Arabidopsis thaliana MYB transcription factor (At5g26660) mRNA, complete cds. |
| GenBank | BT008740 | 0.0 | BT008740.1 Arabidopsis thaliana At5g26655 gene, complete cds. |
