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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
KFK25152.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
|
| Family |
MYB |
| Protein Properties |
Length: 357aa MW: 40260.6 Da PI: 5.0748 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KFK25152.1 | genome | MPIPBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 48.9 | 1.5e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT eEd++l+ ++ + G g W+ I+++ g++R++k+c++rw +yl
KFK25152.1 14 KGAWTMEEDKKLISYIYENGEGGWRDIPQKAGLKRCGKSCRLRWTNYL 61
79********************************************97 PP
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| 2 | Myb_DNA-binding | 42.7 | 1.3e-13 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg ++ eE+++++ +++ G++ W+ ar+++ +Rt++++k++w+++l
KFK25152.1 67 RGEFSYEEEQIIIMLHASRGNK-WSVMARHLP-KRTDNEIKNYWNTHL 112
899*******************.*********.************996 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009611 | Biological Process | response to wounding |
| GO:0009625 | Biological Process | response to insect |
| GO:0009682 | Biological Process | induced systemic resistance |
| GO:0009739 | Biological Process | response to gibberellin |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:0010439 | Biological Process | regulation of glucosinolate biosynthetic process |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MSRKPCCVGE GLKKGAWTME EDKKLISYIY ENGEGGWRDI PQKAGLKRCG KSCRLRWTNY 60
LKPDIKRGEF SYEEEQIIIM LHASRGNKWS VMARHLPKRT DNEIKNYWNT HLKKRLIDQG 120
LDPVTHKPVS SNPKQGMPKS SDVEDDSNPS NPDEHSQSRS MSPKSLPPSS SHNLPEIISS 180
DGTPKNEGSL SSKKHCFKRT SSTSKLLNKV ATRASSIANI LSASMEGTLM SSTTLSPSLN 240
EFSENSPFQM DEFDLFPHSS EHIVDHMKED IGMLDIDLNN PEYDFSNFLE QFSHIEGEEA 300
ENSGGYNQDP IPSDVSSTSV DEDNMMPDIT GWSNYLLDHS DFTSDTTQDY DAKDFFI
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Plays a minor rheostat role in aliphatic glucosinolates (GLSs) biosynthesis, mostly short chained. Together with MYB28/HAG1 and MYB76/HAG2, promotes aliphatic glucosinolate biosynthesis but represses indolic glucosinolate biosynthesis. Prevents insect performance (e.g. lepidopteran insect Mamestra brassicae) by promoting glucosinolates. {ECO:0000269|PubMed:17420480, ECO:0000269|PubMed:18042203, ECO:0000269|PubMed:18446225, ECO:0000269|PubMed:20348214, ECO:0000269|PubMed:23580754, ECO:0000269|PubMed:23792303, ECO:0000269|PubMed:23943862}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Slightly induced by gibberellic acid (GA), jasmonic acid (JA, MeJA), nitrogen starvation and UV LIGHT treatment. Transiently repressed by salicylic acid (SA). Accumulates upon mechanical stimuli (e.g. wounding) in inflorescence. Down-regulated by sulfur-deficient stress. {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:18042203, ECO:0000269|PubMed:23792303, ECO:0000269|PubMed:9839469}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Kim K,Jiang K,Teng SL,Feldman LJ,Huang H
Using biologically interrelated experiments to identify pathway genes in Arabidopsis.
Bioinformatics, 2012. 28(6): p. 815-22
[PMID:22271267] - Araki R, et al.
Novel bioresources for studies of Brassica oleracea: identification of a kale MYB transcription factor responsible for glucosinolate production.
Plant Biotechnol. J., 2013. 11(8): p. 1017-27
[PMID:23910994] - Guo R, et al.
Jasmonic acid and glucose synergistically modulate the accumulation of glucosinolates in Arabidopsis thaliana.
J. Exp. Bot., 2013. 64(18): p. 5707-19
[PMID:24151308] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Frerigmann H,Gigolashvili T
Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
Front Plant Sci, 2014. 5: p. 626
[PMID:25426131] - Burow M, et al.
The Glucosinolate Biosynthetic Gene AOP2 Mediates Feed-back Regulation of Jasmonic Acid Signaling in Arabidopsis.
Mol Plant, 2015. 8(8): p. 1201-12
[PMID:25758208] - Martínez-Ballesta M, et al.
The impact of the absence of aliphatic glucosinolates on water transport under salt stress in Arabidopsis thaliana.
Front Plant Sci, 2015. 6: p. 524
[PMID:26236322] - Bulgakov VP,Veremeichik GN,Grigorchuk VP,Rybin VG,Shkryl YN
The rolB gene activates secondary metabolism in Arabidopsis calli via selective activation of genes encoding MYB and bHLH transcription factors.
Plant Physiol. Biochem., 2016. 102: p. 70-9
[PMID:26913794] - Mostafa I, et al.
New nodes and edges in the glucosinolate molecular network revealed by proteomics and metabolomics of Arabidopsis myb28/29 and cyp79B2/B3 glucosinolate mutants.
J Proteomics, 2016. 138: p. 1-19
[PMID:26915584] - Smith JD,Woldemariam MG,Mescher MC,Jander G,De Moraes CM
Glucosinolates from Host Plants Influence Growth of the Parasitic Plant Cuscuta gronovii and Its Susceptibility to Aphid Feeding.
Plant Physiol., 2016. 172(1): p. 181-97
[PMID:27482077] - Zhang X, et al.
The Transcription Factor MYB29 Is a Regulator of ALTERNATIVE OXIDASE1a.
Plant Physiol., 2017. 173(3): p. 1824-1843
[PMID:28167700] - Mostafa I, et al.
Membrane Proteomics of Arabidopsis Glucosinolate Mutants cyp79B2/B3 and myb28/29.
Front Plant Sci, 2017. 8: p. 534
[PMID:28443122] - Li B, et al.
Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
Plant Cell, 2018. 30(1): p. 178-195
[PMID:29317470]
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