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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KFK22898.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
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Family | bZIP | ||||||||
Protein Properties | Length: 244aa MW: 27937.5 Da PI: 7.5775 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 52.3 | 1.2e-16 | 174 | 222 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r++r++kNRe+A rsR+RK+a++ eLe kv Le+eN++L+ +l+e +k KFK22898.1 174 RRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENEKLR-RLNEVEK 222 79****************************************.8888777 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.5E-15 | 166 | 216 | No hit | No description |
SMART | SM00338 | 1.6E-11 | 170 | 226 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.197 | 172 | 216 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-13 | 174 | 217 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.75E-10 | 174 | 218 | No hit | No description |
CDD | cd14707 | 2.14E-22 | 174 | 219 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 177 | 192 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MNLDDLLKTV FSSETNQPPQ EATTTEERFS RQGSFTLPRD LSKKTVDEVW RDIQQDKNET 60 NTTTTTSTSH NKQPILGEIT LEDLLLKAGV VTETLQMPQD VVNVASNGPW IQYHQPPPHL 120 QQQQGFMSYP ICEMQEMVSP TSLMMCGLSD TQQALGRKRV GSSGGEIVEK TVERRQKRMI 180 KNRESAARSR ARKQAYTHEL EIKVSRLEEE NEKLRRLNEV EKILPSEPPP DPKWKLRRTS 240 STTF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KFK22898.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF334209 | 6e-90 | AF334209.1 Arabidopsis thaliana bZIP protein DPBF4 mRNA, complete cds. | |||
GenBank | AJ420881 | 6e-90 | AJ420881.1 Arabidopsis thaliana partial mRNA for basic leucine zipper transcription factor (atbzip12 gene). | |||
GenBank | AK118113 | 6e-90 | AK118113.1 Arabidopsis thaliana At2g41070 mRNA for putative bZIP transcription factor AtbZIP12 / DPBF4, complete cds, clone: RAFL19-38-L08. | |||
GenBank | AY084668 | 6e-90 | AY084668.1 Arabidopsis thaliana clone 114632 mRNA, complete sequence. | |||
GenBank | BT025175 | 6e-90 | BT025175.1 Arabidopsis thaliana At2g41070 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006411374.1 | 1e-125 | ABSCISIC ACID-INSENSITIVE 5-like protein 3 | ||||
Swissprot | Q9C5Q2 | 1e-114 | AI5L3_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 3 | ||||
TrEMBL | A0A087FZ46 | 1e-180 | A0A087FZ46_ARAAL; Uncharacterized protein | ||||
STRING | A0A087FZ46 | 0.0 | (Arabis alpina) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1884 | 28 | 83 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41070.3 | 1e-94 | bZIP family protein |
Publications ? help Back to Top | |||
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