![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | KFK22532.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 176aa MW: 19828.5 Da PI: 8.5879 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.4 | 2e-10 | 33 | 78 | 10 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 k N e+A rsRqR+ ++ Le+ v +L++e +L++ ++l++ KFK22532.1 33 KLANQESAARSRQRRAQYKSDLEDQVVTLKTETNTLQNMYNQLQNA 78 678******************************9999888888775 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.0E-6 | 25 | 88 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.6E-10 | 30 | 78 | No hit | No description |
SuperFamily | SSF57959 | 2.13E-9 | 31 | 82 | No hit | No description |
Pfam | PF00170 | 5.2E-8 | 31 | 77 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 3.60E-11 | 31 | 80 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 31 | 46 | IPR004827 | Basic-leucine zipper domain |
CDD | cd00162 | 5.12E-5 | 126 | 167 | No hit | No description |
SuperFamily | SSF57850 | 2.42E-8 | 126 | 170 | No hit | No description |
Gene3D | G3DSA:3.30.40.10 | 1.6E-11 | 126 | 173 | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
PROSITE profile | PS50089 | 9.258 | 127 | 164 | IPR001841 | Zinc finger, RING-type |
Pfam | PF13920 | 3.3E-13 | 127 | 170 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 176 aa Download sequence Send to blast |
MSPTLPPLNP SSASFRSTKP ALLPDHTLPQ RGKLANQESA ARSRQRRAQY KSDLEDQVVT 60 LKTETNTLQN MYNQLQNAHT VMGNEFRDLS IRHEGAVKQV HLHQGDDADL EEFMGNEGDS 120 TTWRSAICFD APRDCFFLPC GHCVSCYQCG TKIAEASGSC PICRRKLKKV KRIFRM |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 40 | 48 | ARSRQRRAQ |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | KFK22532.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A087FY30 | 1e-131 | A0A087FY30_ARAAL; Uncharacterized protein | ||||
STRING | A0A087FY30 | 1e-131 | (Arabis alpina) |