 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KFK22204.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
|
| Family |
TCP |
| Protein Properties |
Length: 387aa MW: 40980.1 Da PI: 7.383 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KFK22204.1 | genome | MPIPBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 123.6 | 2.2e-38 | 55 | 171 | 2 | 115 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg...kaaksaa. 95
+++k++ +++h kv+gR+RR+R++a caar+F+L++eL +++d++tieWLl+qa+pai+++tgt++++a+++ ++s +ss+s+ s++ + +++
KFK22204.1 55 TTAKRPAKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLNQAEPAIIAATGTGTIPANFStLNVSLRSSGSTLSKSapiS---FHNs 150
6789*****************************************************************99999999999999777774441...3332 PP
TCP 96 .kskksqksaasalnlakesr 115
+ +++++++ ++ ++ ++
KFK22204.1 151 aLKLYDETHTNNSSSSDDPTS 171
122222222332333333333 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0005634 | Cellular Component | nucleus |
| Sequence ? help Back to Top |
| Protein Sequence Length: 387 aa
Download sequence Send
to blast |
MESHKNNNNQ SNTDHHHQQT TGSAHLVPFM GPNSGSTSLT TTTNAAADTV SVPKTTAKRP 60
AKDRHIKVDG RGRRIRMPAI CAARVFQLTR ELQHKSDGET IEWLLNQAEP AIIAATGTGT 120
IPANFSTLNV SLRSSGSTLS KSAPISFHNS ALKLYDETHT NNSSSSDDPT SRKFIGRAAQ 180
NAAVFGFQQQ LYPPHHIMSH DPNSLPKSFR EEDLFKDPNS FHHDNTGGSS SPKPGSEGSD 240
QDPGSTRSRT QNMIPPMWAV AAPTPTSANG GSAFWMLPVG GGGGPPAQDP SQHMWAFNPG 300
HYPGRIGSVQ LGSMLVQQAA VGGQQLGLNV VDSNNLGMFS GGEGGYGGGG SGRVCLGMSL 360
EQKDQLHEHH QVTDATGDQN PTIAGSP
|
