|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Jcr4S21289.10 |
Common Name | GRAS28, JCGZ_16682, LOC105641161 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
|
Family |
GRAS |
Protein Properties |
Length: 435aa MW: 47448.7 Da PI: 5.6046 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Jcr4S21289.10 | genome | Kazusa | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 377.2 | 2e-115 | 72 | 432 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
lLl+cAe+v+ ++l a+ lL ++sel+sp g++ +R+ ayf+ AL+ar+++s+ ++y+ l++++ + ++s++ +a++ ++ +sP++kfsh+ta
Jcr4S21289.10 72 GLLLQCAECVAMDNLDDATDLLPEISELSSPFGSSPERVGAYFAHALQARVVSSCLGTYSPLTSKSLTLTQSQKIYNAFQSYNSISPLIKFSHFTA 167
58******************************************************************9*************************** PP
GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
NqaI +a++ge++vH+iD+di+qGlQWp L++ LasR+++ s+RiTg+gs s+e le+tg+rLa+fA++lg+pfef+++ k + ++++L
Jcr4S21289.10 168 NQAIFQALDGEDCVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGS----SSELLESTGRRLADFASSLGLPFEFHPVEGKIGNVTDVSQL 259
***************************************************....9**************************7666666679**** PP
GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
v+++Ea++V++++ h l+d ++s +L+l+ l+Pk+++ veq+++h +++Fl rf+eal+yysalfd+l +l+++s er++vE++l+
Jcr4S21289.10 260 GVRSREAVVVHWMH--HCLYDITGSDLG----TLRLLTLLRPKLITTVEQDLSH-GGNFLGRFVEALHYYSALFDALGDGLGADSVERHTVEQQLF 348
************99..777777777777....9*********************.789************************************** PP
GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvsvSaWr 374
g ei+n+va g +r+ + + +e+W + l+++GF+pv+l+ + a+qa+lll++++++gy++ ee+g+l lgWkd +++++SaWr
Jcr4S21289.10 349 GCEIRNIVAVGGPKRTGEVK-VERWGDELKRVGFQPVSLGGNPATQASLLLSMFPWKGYTLVeEENGCLKLGWKDLSVLTASAWR 432
**************998887.9*************************************97637799999**************8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 435 aa
Download sequence Send
to blast |
MLQSLVPQSP INSTPTTTNS TSSMKTKRVD RDASGDDPSS KRPNFSSEAT VSGDKTTAEE 60 DSTETTGLRL LGLLLQCAEC VAMDNLDDAT DLLPEISELS SPFGSSPERV GAYFAHALQA 120 RVVSSCLGTY SPLTSKSLTL TQSQKIYNAF QSYNSISPLI KFSHFTANQA IFQALDGEDC 180 VHVIDLDIMQ GLQWPGLFHI LASRSKKIRS MRITGFGSSS ELLESTGRRL ADFASSLGLP 240 FEFHPVEGKI GNVTDVSQLG VRSREAVVVH WMHHCLYDIT GSDLGTLRLL TLLRPKLITT 300 VEQDLSHGGN FLGRFVEALH YYSALFDALG DGLGADSVER HTVEQQLFGC EIRNIVAVGG 360 PKRTGEVKVE RWGDELKRVG FQPVSLGGNP ATQASLLLSM FPWKGYTLVE EENGCLKLGW 420 KDLSVLTASA WRPLD
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KM405252 | 0.0 | KM405252.1 Jatropha curcas GRAS28 protein (GRAS28) mRNA, complete cds. |