PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S10743.10
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family GRAS
Protein Properties Length: 229aa    MW: 26091.6 Da    PI: 8.3216
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S10743.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS24.82.5e-081021971100
           GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkfsh 95 
                    lv+ Ll+ Ae v ++++    +lL++++ l     dp+qR++ yf eAL++r+   + +++++ ++ + +  + +++l++  + ++++ P+ +++h
  Jcr4S10743.10 102 LVQCLLASAEKVGNQQFYSGGRLLKNIHGLFPL--DPVQRVVYYFPEALQERIDA-QLGIVEKKQSLDMH--EAITTLSSPAIaYHQAIPFCRIAH 192
                    578899999999999999999999999998765..8******************9.55666555544444..355555555556************ PP

           GRAS  96 ltaNq 100
                    +  N+
  Jcr4S10743.10 193 FFSNS 197
                    **997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035148.7E-6102197IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MNXIYQENIW RQLEQSKKGN AFPFELLRQY NKGFKRLKIE EKDIPCNNKA ACQELSTEEI  60
LRIAGTRFLK SSSQAIDVVH MLKNPSHISL GFSDEAIRDV ELVQCLLASA EKVGNQQFYS  120
GGRLLKNIHG LFPLDPVQRV VYYFPEALQE RIDAQLGIVE KKQSLDMHEA ITTLSSPAIA  180
YHQAIPFCRI AHFFSNSGYS RARSQSEWAL ELLKRTDIGT TSKHLIDST
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015883178.16e-48DELLA protein RGL1-like