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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Jcr4S06478.40 |
Common Name | JCGZ_23378, LOC105647578 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family |
bHLH |
Protein Properties |
Length: 326aa MW: 37049.5 Da PI: 5.2842 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Jcr4S06478.40 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 40.2 | 6e-13 | 127 | 178 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P + + ++ + a+i A++++k+L+
Jcr4S06478.40 127 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YVQRGDQASIIGGAINFVKELE 178
79****************************...9******************995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MALEAVVYQQ DLFGHSTKEF YNLLGGNWSY EFGQLEKEDH HDYNKAAGCF ENFLDNQTEN 60 GLHGDWNNSS SSPPSIMPHL SEMLQINPSS EPNNDSNQLL ESPSTMPARA KRRRSRSRKN 120 KEEIENQRMT HIAVERNRRK QMNEYLSVLR SLMPDSYVQR GDQASIIGGA INFVKELEQR 180 LQLLGGEKQV KEEKSQGEEC PLPFSDFFTF PQYSTTRSDS SVTGVNETMS ATTESSIADI 240 EVTMVESHAN VKIRSKRRPK QLLKIVSGLH SMRLTILHLN VTTLDQIVLY SLSVKVEDDC 300 NLSSVDEIAT AVYEMLGRIQ EEYSVM
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 127 | 138 | RMTHIAVERNRR |