|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Jcr4S04807.10 |
Common Name | JCGZ_20055, LOC105650911 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
|
Family |
GATA |
Protein Properties |
Length: 315aa MW: 34898 Da PI: 9.4245 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Jcr4S04807.10 | genome | Kazusa | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 55.3 | 9.2e-18 | 219 | 252 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C +C tkTp+WR gp g+ktLCnaCG++y++ +
Jcr4S04807.10 219 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 252
99*****************************987 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0007623 | Biological Process | circadian rhythm |
GO:0009845 | Biological Process | seed germination |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MIGPANFMDE IDCGSFFDHI DDLLDFPTDX XXXXXPPSTT MELRYEDIVQ LEWLSNFVED 60 SFSGGSLTIN NSSKNKEGST SINKDSSRQF QTSSPVSVLE SSSSCSGEKT APRSPEIIAS 120 GRRGRARSKR PRPASFTPRP AMQLISPSSS VSETHHPFAV PKVSSDSENY AESRLLIKLP 180 KQVAPEQKKK KKIKFTVPIV PSETSQNSPP QQQQAVRKCM HCEITKTPQW RAGPMGPKTL 240 CNACGVRYKS GRLFPEYRPA ASPTFVPSLH SNSHKKVLEM RTKTTTKTNV PGNATMMTNS 300 PELIPNDNNL AMDYM
|