PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S04203.10
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family EIL
Protein Properties Length: 477aa    MW: 54816.4 Da    PI: 4.5455
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S04203.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3387.81.6e-118333481354
                    XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
           EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 
                    ++lkkrmwkd+m++++lke+ +++    e    +++s+ ++e++r+kkmsraQD+iLkYM+k+mevc+aqGfvYgi+p+kgkpv+g+sdsLr+WWk
  Jcr4S04203.10  33 DDLKKRMWKDRMRMQKLKEKFNDE----E----SQESSARQEASRKKKMSRAQDSILKYMVKIMEVCKAQGFVYGIVPDKGKPVTGSSDSLRQWWK 120
                    79*****************99983....3....3567789******************************************************** PP

                    XXXXXXXXXXXXXXXX..XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
           EIN3  97 ekvefdrngpaaisky..qaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                    ekv+fd+n+p ai++   + +++     ++l  ++ s  h l+elqDTtlgSLLsalmq c ppqrrfp e+g++pPWWPtG+e wwge+g ++++
  Jcr4S04203.10 121 EKVRFDQNAPLAIAEFlpDLEKVT----KEL--NPDSCMHLLQELQDTTLGSLLSALMQRCVPPQRRFPFERGLPPPWWPTGNEIWWGEQGSAQEH 210
                    **************9943333222....344..68899********************************************************** PP

                    -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
           EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedveg 286
                    g+ppykkphdlkkawkvsvL+av+k++sp+++++++++ qsk+lq km+akes+++++++nqee++             q +++ l+ ++++d+e 
  Jcr4S04203.10 211 GPPPYKKPHDLKKAWKVSVLAAVVKQLSPNFDRMKRSVTQSKCLQAKMTAKESATWSKIVNQEEALS------------QLTQTCLQINDDDDKED 294
                    ***************************************************************9855............45555555554444443 PP

                    XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS
           EIN3 287 kkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqney 354
                    +++             +++v +krk    +++++ +k   +  ++sq+++s+  l+f  kns+ ++ey
  Jcr4S04203.10 295 EQDYL-----------KLQVSEKRK-CVFDREACVDK--LYASKNSQCPQSQLGLGFVGKNSRIDHEY 348
                    33333...........689999999.78888888888..7***********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.0E-11333274No hitNo description
Gene3DG3DSA:1.10.3180.102.1E-65151279IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167686.28E-57153276IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MVEFYEEIDS SIPFQEEDGD MNVEQEDEEI SYDDLKKRMW KDRMRMQKLK EKFNDEESQE  60
SSARQEASRK KKMSRAQDSI LKYMVKIMEV CKAQGFVYGI VPDKGKPVTG SSDSLRQWWK  120
EKVRFDQNAP LAIAEFLPDL EKVTKELNPD SCMHLLQELQ DTTLGSLLSA LMQRCVPPQR  180
RFPFERGLPP PWWPTGNEIW WGEQGSAQEH GPPPYKKPHD LKKAWKVSVL AAVVKQLSPN  240
FDRMKRSVTQ SKCLQAKMTA KESATWSKIV NQEEALSQLT QTCLQINDDD DKEDEQDYLK  300
LQVSEKRKCV FDREACVDKL YASKNSQCPQ SQLGLGFVGK NSRIDHEYVY RPEESDITQE  360
NILSFFDQPL ISPDQMIGAT MHNNSYSGDL SGITDWGLEK DNSNRSDLSI MEVGEGTVFK  420
MEDYQSCWGT AGIGDSALQG FGFEINRENM HVNPNVSLEN SLPEQEETSI WDWGFDE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-561512781128Protein ETHYLENE INSENSITIVE 3
4zds_B1e-561512781128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012064823.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-129EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A2C9UQ930.0A0A2C9UQ93_MANES; Uncharacterized protein
STRINGXP_002533137.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-123EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]