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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Jcr4S03691.50 |
| Common Name | JCGZ_14207 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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| Family |
HD-ZIP |
| Protein Properties |
Length: 238aa MW: 27294.2 Da PI: 4.5016 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Jcr4S03691.50 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.3 | 1.5e-19 | 35 | 89 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++++f++eq++ Le++Fe+++ + +++ +LAk+lgL+ rqV +WFqN+Ra++k
Jcr4S03691.50 35 KNKRRFSDEQIKSLETMFESESRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWK 89
67789*************************************************9 PP
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| 2 | HD-ZIP_I/II | 122.3 | 2.4e-39 | 36 | 127 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
+krr+s+eq+k+LE++Fe+e++Lep++K +la+eLglqprqva+WFqn+RAR+k+kqlE+dy++L+++y++l+++ e+L+ke+++L+ +l++
Jcr4S03691.50 36 NKRRFSDEQIKSLETMFESESRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYSVLRANYNNLASRFETLKKEKQALAIQLQK 127
79*************************************************************************************99986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009615 | Biological Process | response to virus |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 238 aa
Download sequence Send
to blast |
MFDEEEVYSP CASAEDLFTA MDTALSTTSR RKKTKNKRRF SDEQIKSLET MFESESRLEP 60
RKKLQLAKEL GLQPRQVAIW FQNKRARWKS KQLERDYSVL RANYNNLASR FETLKKEKQA 120
LAIQLQKLNE LIEKPREEGE CCGEQETGVN SSEGESEAKG VISSFERSRN GLGVASDEDS 180
SIKVEYFGLE EEPDNNLISM VEAADGSLTS QEDWRSLESD GLFDQSNSGS DQWWDFWA
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269|PubMed:11374882, ECO:0000269|PubMed:15604708}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By water deficit, by abscisic acid (ABA), by cold and salt stress. {ECO:0000269|PubMed:15369784, ECO:0000269|PubMed:16055682, ECO:0000269|PubMed:9617808}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KF022009 | 0.0 | KF022009.1 Jatropha curcas homeobox 12 (HB12) mRNA, complete cds. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Zhang L, et al.
Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
PLoS ONE, 2014. 9(5): p. e97878
[PMID:24837971] - Liu C,Wang B,Li Z,Peng Z,Zhang J
TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth.
Plant Physiol., 2018. 176(1): p. 742-756
[PMID:29122985] - Huang KC,Lin WC,Cheng WH
Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis.
BMC Plant Biol., 2018. 18(1): p. 40
[PMID:29490615]
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