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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Jcr4S02502.30 |
| Common Name | JCGZ_14572, LOC105643168 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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| Family |
C2H2 |
| Protein Properties |
Length: 361aa MW: 41156.5 Da PI: 6.2091 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Jcr4S02502.30 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.9 | 0.00033 | 4 | 26 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C+ C ksFs+ L H+r+H
Jcr4S02502.30 4 HRCKLCLKSFSNGRALGGHMRSH 26
79********************9 PP
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| 2 | zf-C2H2 | 13.3 | 0.00024 | 232 | 254 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
ykC+ C+k+F++ L H +H
Jcr4S02502.30 232 YKCETCKKVFKSYQALGGHRASH 254
9************9999998887 PP
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| 3 | zf-C2H2 | 12.7 | 0.00038 | 285 | 307 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++Cp+C ++Fs+ L H r+H
Jcr4S02502.30 285 HECPYCFRVFSSGQALGGHKRSH 307
79******************999 PP
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| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| Pfam | PF13912 | 3.3E-8 | 3 | 27 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 6.58E-5 | 3 | 30 | No hit | No description |
| SMART | SM00355 | 0.035 | 4 | 26 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 10.596 | 4 | 31 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 6 | 26 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.023 | 232 | 254 | IPR015880 | Zinc finger, C2H2-like |
| Pfam | PF13912 | 7.1E-11 | 232 | 256 | IPR007087 | Zinc finger, C2H2 |
| PROSITE profile | PS50157 | 10.388 | 232 | 259 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 1.64E-7 | 232 | 307 | No hit | No description |
| PROSITE pattern | PS00028 | 0 | 234 | 254 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF13912 | 4.8E-11 | 284 | 307 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.17 | 285 | 307 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 9.286 | 285 | 307 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 287 | 307 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MERHRCKLCL KSFSNGRALG GHMRSHMLNL PIPPKPEEDP TIQLSEETES ASSSSSSSEE 60
EGEAEGDDKG VYYGLRENPK RSIRLVDPEF SFAVDATSVV LQDRESETES SKNPTRRRSK 120
RTRSLLEHQY HHHQQRQQEQ ENNFKKLIFS KLSKTESWAE PEPVSSISDT TAEEDVAFCL 180
MMLSRDKWKR REQLLQNNRE QEEEEAEAEK SIEETDESDE FKSCKTRNRG KYKCETCKKV 240
FKSYQALGGH RASHKKLKNY TQNRETELET ENAGTSTSAV EKKVHECPYC FRVFSSGQAL 300
GGHKRSHVTG LGTTPARSST KVEDNLNLID LNLPAPIEDD DISQIELSAV SDAEFVNHIK 360
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