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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Jcr4S01174.60 |
Common Name | JCGZ_26804, LOC105630155 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family |
bHLH |
Protein Properties |
Length: 434aa MW: 48168 Da PI: 6.8822 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Jcr4S01174.60 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 30.7 | 5.7e-10 | 233 | 280 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq
Jcr4S01174.60 233 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 280
8**************************....999*****************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006351 | Biological Process | transcription, DNA-templated |
GO:0009637 | Biological Process | response to blue light |
GO:0009911 | Biological Process | positive regulation of flower development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 434 aa
Download sequence Send
to blast |
MNRALLPEML HCTDMTVLER QRARFKWQQE QQQQNPVQIE QESFNFGDLS GVFQLQQQQQ 60 GFQGDLGEVV TRSVKPDPGL IDNGWPDLVA FGSACGYGNS NGSGFGTNYG ISRTSSCPPA 120 VAAAAVADAA AVASRKLSSG VGRESLKKRK ADKVQNNTKV AAEDDSRVDK RIKGCAEEGE 180 SKITDKTNNK TNSSKNINKE NSAETSKDNS KVTEIQKPDY IHVRARRGQA TDSHSLAERV 240 RREKISERMK YLQDLVPGCN KITGKAGMLD EIINYVQSLQ RQVEFLSMKL AAVNPRLDFN 300 IDNLFAKENF PACVTNFPTI GMSSDMTNPA YLQFNPVQQQ QQHQQQQQLV TCCGLDIGIN 360 NPSDIVLRRT ISAPISMPEM FVDSSCFTQI QPSSTWDADL QNLYNVAFDQ SRSTSFPTQP 420 FTGTIEPSNL KMEM
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT4G34530.1 | 2e-62 | cryptochrome-interacting basic-helix-loop-helix 1 |