PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S01114.30
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bHLH
Protein Properties Length: 234aa    MW: 25775.3 Da    PI: 5.046
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S01114.30genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.22.9e-1373142354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC.....................TTS-STCHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkas..................kapskKlsKaeiLekAveYIksL 54 
                    r+h e+Er+RR+riNs +++Lr l+P a                      s  ++Ka+ L k++ Y+k+L
  Jcr4S01114.30  73 RNHCEAERKRRARINSHLDTLRNLVPGAKkfcldvfvevpaygaiefDILSSQMDKASLLAKVISYLKEL 142
                    57*************************888*****************99999****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.97E-1364147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.86270142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-1373144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-1173142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.76E-1273143No hitNo description
SMARTSM003532.7E-1276148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2602.2E-5179224No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MEPHSWSSSV VTSDLEGLCD GFYMTSGFEA KTRNESCSSS SLVLDSQRGE LVEATVTVGR  60
KGVPAERSVE ALRNHCEAER KRRARINSHL DTLRNLVPGA KKFCLDVFVE VPAYGAIEFD  120
ILSSQMDKAS LLAKVISYLK ELKSTAAEAS EGFLVPTDTD EVRVEGQENG LDGTPCIIRV  180
SLSCDYKPGL LSDLRQALNK LQLTVMQAEI ATLEDRMKNV FVMTSCKEGH SEKY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012079056.21e-147putative transcription factor bHLH107 isoform X2
TrEMBLA0A067KIZ31e-146A0A067KIZ3_JATCU; Uncharacterized protein
STRINGXP_002525116.11e-101(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106852538
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.19e-27bHLH family protein