PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00452.20
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family Dof
Protein Properties Length: 308aa    MW: 33158.5 Da    PI: 8.888
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00452.20genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof127.73.5e-403191262
         zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                   +e+alkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk++
  Jcr4S00452.20 31 QEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKMK 91
                   5799******************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-272889IPR003851Zinc finger, Dof-type
PfamPF027011.9E-333389IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.4323589IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103773IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010052Biological Processguard cell differentiation
GO:0010118Biological Processstomatal movement
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1902066Biological Processregulation of cell wall pectin metabolic process
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MMSPNSLQGK QANKEENQNS GNRKTAASRP QEQALKCPRC DSPNTKFCYY NNYSLTQPRH  60
FCKTCRRYWT KGGALRNVPI GGGCRKNKKM KSSSRLSCDS KDSSGSSEIG GFKFFHGLSP  120
AMDFNLGGSA TAGSVTSPCF SLDPSGSSSG TLMGLNYPIS SGFTGAIQEM GGGGVGGGNG  180
GSMNVHTNLA SSIESLSSIN QDLHWKLQQQ RLAMLFGGED QKDNNKVNVA GNSRRLGDTT  240
TEWFFGNSYG QVNPTTPANS NSNGNDQNAG VASNWNGVQG WSDLHQYNEK RVIKNIETDE  300
AEGRPLDY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF0220181e-163KF022018.1 Jatropha curcas Dof zinc finger protein DOF5.7 (Dof5.7) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012081705.10.0dof zinc finger protein DOF5.7
TrEMBLA0A067KD940.0A0A067KD94_JATCU; Uncharacterized protein
STRINGXP_002532379.11e-141(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38543460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.13e-53Dof family protein