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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Jcr4S00326.60 |
Common Name | JCGZ_23252, LOC105647452 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family |
GATA |
Protein Properties |
Length: 159aa MW: 18001 Da PI: 10.2905 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Jcr4S00326.60 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 61.9 | 7.8e-20 | 27 | 61 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C+ C+ttkTplWR gp g+k+LCnaCG++yrkk++
Jcr4S00326.60 27 CTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRR 61
********************************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 159 aa
Download sequence Send
to blast |
MVYGLMDLSE RKSWCEENGS VEIKKYCTDC KTTKTPLWRG GPAGPKSLCN ACGIRYRKKR 60 RAMLGLEKDS VKKKRTHITS LTTITTSSAN TSNNTSDSNC NADELKESLK MRLIVVDGKM 120 MFQRSSIVKK QRCQRRRKLR EEEQAAFCLM ALSCGSIFA
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 58 | 74 | KRRAMLGLEKDSVKKKR |
2 | 72 | 76 | KKRTH |