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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Jcr4S00247.70 |
Common Name | JCGZ_07730, LOC105638209 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family |
GATA |
Protein Properties |
Length: 371aa MW: 40749.9 Da PI: 6.0436 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Jcr4S00247.70 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 55.1 | 1.1e-17 | 262 | 296 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +C t kTp+WR gp g+ktLCnaCG++y++ +l
Jcr4S00247.70 262 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 296
99*****************************9885 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0007623 | Biological Process | circadian rhythm |
GO:0009416 | Biological Process | response to light stimulus |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 371 aa
Download sequence Send
to blast |
MEAPEFYNQN GFCSPFSNEK HHSLDSKPTG GGGGDHFIVE DLLDFSNEDA VITDGGVAFD 60 NVTGNSTDSS SVTVVDSCNS SSFSGCEPCF NGGDIGSRNL ADVQFSSDLC VPYDDLAELE 120 WLSNFVEESF SSEDLQKLQL ISGIKARPDE SSETRNFQPD CNGNDNTNNN NNNDVVAINN 180 NNNPIFHPEM SVPAKARSKR SRAAPCNWAS RLLVLSPTTT SPEPEIIVGP TTQHPSSGKK 240 TIKGTGPKRR DGGDGNGDGR KCLHCATDKT PQWRTGPMGP KTLCNACGVR YKSGRLVPEY 300 RPAASPTFVL TKHSNSHRKV LELRRQKELL RAQQQQQQQF LHHHQNMVFD VSNGDDYLIH 360 QHVGPDFRQL I
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). Transcription activator involved in xylem formation. Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867). {ECO:0000250|UniProtKB:Q8LAU9, ECO:0000269|PubMed:25265867}. |