|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Jcr4S00094.130 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
|
Family |
bHLH |
Protein Properties |
Length: 245aa MW: 27071.5 Da PI: 5.205 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Jcr4S00094.130 | genome | Kazusa | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 16.2 | 1.9e-05 | 39 | 82 | 5 | 52 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52
+ erE+ R+++N+ f eL + l ++ + Ka+iL +A++ +k
Jcr4S00094.130 39 KAEREKLKREQLNELFLELASALELT----QPNNGKASILSEATKLLK 82
579********************997....57799999*****99887 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010106 | Biological Process | cellular response to iron ion starvation |
GO:0055072 | Biological Process | iron ion homeostasis |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MSSETPSLAA DEVNVTAEAN ENGCCHGKSK GKVPKGIHKA EREKLKREQL NELFLELASA 60 LELTQPNNGK ASILSEATKL LKDFLVQIEC LKKENASLLS ESHYVRLLLH PDKDKISCDG 120 VLNVTTEKNE LKEENSVLQT QIEGLQSELE ARMVQSKPDL NAPPPEFEQP ELTSHFPGDS 180 LRLPTADASL QQTSAVFVIP FHHDLQTYSV TASNVSKPHA RYPNPADSWP SQLLGEQVTA 240 RKEVQ
|
Publications
? help Back to Top |
- Rodríguez-Celma J, et al.
The transcriptional response of Arabidopsis leaves to Fe deficiency. Front Plant Sci, 2013. 4: p. 276 [PMID:23888164] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Martínez-Trujillo M, et al.
Chromate alters root system architecture and activates expression of genes involved in iron homeostasis and signaling in Arabidopsis thaliana. Plant Mol. Biol., 2014. 86(1-2): p. 35-50 [PMID:24928490] - Li H,Wang L,Yang ZM
Co-expression analysis reveals a group of genes potentially involved in regulation of plant response to iron-deficiency. Gene, 2015. 554(1): p. 16-24 [PMID:25300251] - Liang G,Zhang H,Li X,Ai Q,Yu D
bHLH transcription factor bHLH115 regulates iron homeostasis in Arabidopsis thaliana. J. Exp. Bot., 2017. 68(7): p. 1743-1755 [PMID:28369511] - Min JH, et al.
Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element. Front Plant Sci, 2017. 8: p. 2100 [PMID:29321786]
|