 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc048482.1_g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
GRAS |
| Protein Properties |
Length: 179aa MW: 20877.1 Da PI: 7.1963 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc048482.1_g00001.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 155.5 | 4.8e-48 | 1 | 178 | 170 | 346 |
GRAS 170 eelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesF 253
e+++vpfefn+ +ak++e++++++L++++gE+l+Vn+ +ql +lld++v ++s +rd+vLkl+ +l P+v+++ ++ +ns+ F
Itr_sc048482.1_g00001.1 1 EKFNVPFEFNA-IAKQWETITVDDLKINEGEVLVVNCLYQLRKLLDDTVVVNSlsPRDTVLKLIHKLHPDVFIHGILNSACNSPLF 85
589********.7************************************999998******************************* PP
GRAS 254 lerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakl 339
rf al++ysa+fd+le+++pre +er+ +E ++g++++n++ace +er+er et++ W++r ++aGF ++pl+ +++k +
Itr_sc048482.1_g00001.1 86 TSRFRAALSHYSAVFDMLEVTIPREVHERMLIESYIFGQQAMNAIACEDTERVERPETYKMWQARNTRAGFLQLPLNREIVKMSMH 171
***********************************************************************************999 PP
GRAS 340 llrkvks 346
l+++++
Itr_sc048482.1_g00001.1 172 TLKRYHK 178
9999985 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 179 aa
Download sequence Send
to blast |
EKFNVPFEFN AIAKQWETIT VDDLKINEGE VLVVNCLYQL RKLLDDTVVV NSLSPRDTVL 60
KLIHKLHPDV FIHGILNSAC NSPLFTSRFR AALSHYSAVF DMLEVTIPRE VHERMLIESY 120
IFGQQAMNAI ACEDTERVER PETYKMWQAR NTRAGFLQLP LNREIVKMSM HTLKRYHKE
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
