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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Itr_sc010894.1_g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
NAC |
| Protein Properties |
Length: 168aa MW: 19301.9 Da PI: 8.0762 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc010894.1_g00001.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 123.2 | 2.3e-38 | 7 | 121 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
l pG+rF+Ptdeelv +yL++kv +++l++ +i e+ +++k++Pw Lp + e yfFs+r +rat sgyWk
Itr_sc010894.1_g00001.1 7 LFPGIRFQPTDEELVFHYLHPKVFNSPLPAY-IILEIdNVCKSDPWVLP------DGERYFFSRR---------CSRATLSGYWKP 76
579***************************5.5666659*********9......4689***985.........6799******** PP
NAM 86 tgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
tgkdk++ ++ ++ vg+kktLvfy+g+ap+g+ktdW+mhey+l
Itr_sc010894.1_g00001.1 77 TGKDKKIAVSgeAQSIVGMKKTLVFYTGKAPNGSKTDWIMHEYSL 121
********98555556***************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 168 aa
Download sequence Send
to blast |
MDNLSLLFPG IRFQPTDEEL VFHYLHPKVF NSPLPAYIIL EIDNVCKSDP WVLPDGERYF 60
FSRRCSRATL SGYWKPTGKD KKIAVSGEAQ SIVGMKKTLV FYTGKAPNGS KTDWIMHEYS 120
LADAPQPEEN WVLCRIFLKK RGGRNDERSH SSSRDAFHDF FAPERADL
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-33 | 7 | 140 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-33 | 7 | 140 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-33 | 7 | 140 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-33 | 7 | 140 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-33 | 7 | 140 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 3e-33 | 7 | 140 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 3e-33 | 7 | 140 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 3e-33 | 7 | 140 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 3e-33 | 7 | 140 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 3e-33 | 7 | 140 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 3e-33 | 7 | 140 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 3e-33 | 7 | 140 | 20 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 2e-33 | 7 | 140 | 17 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 2e-33 | 7 | 140 | 17 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |
