PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Itr_sc006940.1_g00001.1

Organism

Ipomoea trifida

Taxonomic ID

35884

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

EIL

Protein Properties

Length: 338aa MW: 37293.8 Da PI: 4.7027

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Itr_sc006940.1_g00001.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	47.9	3.5e-15	1	136	242	353
HHHHHHHHHTTTTT-S--XXXX.XXXXXXXXXXXXXXXXXXXXXX.XXXXXX.XXXXXXXXXX....................... CS EIN3 242 esfallsvlnqeekecatvsah.ssslrkqspkvtlsceqkedve.gkkeskikhvqavktta....................... 302 es+++l+++nqee+++++ +++ s+++ +s + +++++k+dve ++++++ +vq +k ++ Itr_sc006940.1_g00001.1 1 ESATWLAIVNQEEALARDRCPSlSPTVGAGSGMFSVNDSHKYDVEeVDNDPE-FDVQVQKPNNvdllstgveifnngltdsiqddv 85 79******************8889999************5555555.889999998899***************** PP ..XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 303 ..gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 g+++ rkrk p+++ + + ++tc+ q+++ e +l+f+d+ ++++++ Itr_sc006940.1_g00001.1 86 itGLDFSRKRK--PVDELPILLDHRIYTCEFVQCPYRELRLGFEDRLARDNHQ 136 9*99998..6666666666678***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence Send to blast
ESATWLAIVN QEEALARDRC PSLSPTVGAG SGMFSVNDSH KYDVEEVDND PEFDVQVQKP 60 NNVDLLSTGV EIFNNGLTDS IQDDVITGLD FSRKRKPVDE LPILLDHRIY TCEFVQCPYR 120 ELRLGFEDRL ARDNHQLTCP YRNSAQSRVS NIHMYEVVKP VAFTPQFVQP KAATTTATVV 180 TVPPVNPSPP SFNLSGPGVQ EDGQRMINDL MSFYDTNIPG NKISNTRSSR PAKGQPLQEI 240 QQNNMNEVQP VVFTKQFVQP KAATTAATVV TVPPVNPSPS LPSFNLSGPG VPQDGQRMIN 300 DLMSFYDTNI PGNTISNTRN SGPAKDQPLQ QILQPNIQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019197784.1	1e-108	PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein
Refseq	XP_019197785.1	1e-108	PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein
TrEMBL	A0A068VEZ0	1e-80	A0A068VEZ0_COFCA; Uncharacterized protein
TrEMBL	Q7XZR7	1e-80	Q7XZR7_SOLLC; EIL (Fragment)
STRING	XP_009801714.1	3e-81	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA304	23	178

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20770.1	2e-34	EIL family protein