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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Itr_sc006674.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
NF-YA |
Protein Properties |
Length: 325aa MW: 35429.7 Da PI: 8.0459 |
Description |
NF-YA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc006674.1_g00001.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | CBFB_NFYA | 102.8 | 3.1e-32 | 172 | 228 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
+ep+YVNaKQy++Il+RR++Rak+e +kkl +k rkpylheSRh+hAlrR+RgsgGrF
Itr_sc006674.1_g00001.1 172 QEPVYVNAKQYHGILRRRESRAKAELQKKL-IKVRKPYLHESRHQHALRRARGSGGRF 228
69****************************.**************************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010262 | Biological Process | somatic embryogenesis |
GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
GO:0055046 | Biological Process | microgametogenesis |
GO:0016602 | Cellular Component | CCAAT-binding factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MQPNSKTANL VGANPHNIPH SGDSAEPWWK TAGYNSVPPG MVQGDASDSS SLEQSLDDQS 60 QSDGGVNHEG DDGTEKSQTS KPSHQGRMLE GSCGQVDKNL QPVASVIPDG SDEHLTQPQQ 120 LEFVGHSIAC APNPYIDPYF GQMIAAYGQP LVPPDILDMH RMRMPLPLEM TQEPVYVNAK 180 QYHGILRRRE SRAKAELQKK LIKVRKPYLH ESRHQHALRR ARGSGGRFVK KSDSNAPKQT 240 GSGASLSPRS LTPPAEAAME ADAALRNHYI TCIPPSLQEE APRASNSEVP LYPSCGHAIR 300 SNMIQRGSRV WISGVQAGRQ FIPGL
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Functional Description ? help
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Source |
Description |
UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}. |