 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc004991.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
NF-YB |
| Protein Properties |
Length: 159aa MW: 17118.9 Da PI: 4.7309 |
| Description |
NF-YB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc004991.1_g00002.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YB | 79.4 | 4.8e-25 | 28 | 92 | 28 | 92 |
NF-YB 28 skdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92
++aketvq+cv+efi +vt++a++++++e+rkt+++ddl+wa+ lG+ y+++l+ +++ yr
Itr_sc004991.1_g00002.1 28 RDEAKETVQKCVTEFIHYVTAKANERAKQERRKTVTTDDLIWAMRALGLGSYAQELTDFITDYRA 92
689************************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 159 aa
Download sequence Send
to blast |
MNADDNTNAN MNADNAAAAG YPEIGSDRDE AKETVQKCVT EFIHYVTAKA NERAKQERRK 60
TVTTDDLIWA MRALGLGSYA QELTDFITDY RAKHVHGRAA THLLPPPPVQ QVPFMQGFPV 120
PGFAPGPMND GAGGSASSSS PLGGDYFLDP SYPPTNFDG
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5g49_A | 9e-18 | 29 | 91 | 34 | 96 | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 |
