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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Itr_sc004616.1_g00001.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
NAC |
| Protein Properties |
Length: 357aa MW: 39836.6 Da PI: 7.7917 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc004616.1_g00001.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 160.5 | 6.6e-50 | 29 | 154 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87
+pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg
Itr_sc004616.1_g00001.1 29 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATG 113
79***************************.89***************8778899******************************** PP
NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
d+ + ++++ +glkktLvfy+g+apkg +t+W+m+eyrl
Itr_sc004616.1_g00001.1 114 ADRMIRGENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 154
***************************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MSQQNQDERC QKNIEGEEAA DEHEHDMVMP GFRFHPTEEE LVEFYLRRKV EGKRFNVELI 60
TFLDLYRYDP WELPALAAIG EKEWFFYVPR DRKYRNGDRP NRVTTSGYWK ATGADRMIRG 120
ENSRSIGLKK TLVFYSGKAP KGIRTSWIMN EYRLPHHETE RLQKAEISLC RVYKRAGVDD 180
HHPSLPRSLQ TSRATATAAA SSSSSRGTAA IKKLHESSFS PYQVAEEKIS AETSGSSSTE 240
VGTSLGLSSY QSSYAAPIVP APPSPAFFSA SSSAVAAADD LHRLVNSQQQ ISLQHPQLFQ 300
SLSSPFPPPP MLQPLPPQNL ALPPGSLHAA AAFSDRLWDW SSMGDASRDY GAGNPFK
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-55 | 30 | 175 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-55 | 30 | 175 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-55 | 30 | 175 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-55 | 30 | 175 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 8e-55 | 30 | 175 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 8e-55 | 30 | 175 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 8e-55 | 30 | 175 | 22 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 8e-55 | 30 | 175 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 8e-55 | 30 | 175 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 8e-55 | 30 | 175 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 8e-55 | 30 | 175 | 22 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 8e-55 | 30 | 175 | 22 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 6e-55 | 30 | 175 | 19 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 6e-55 | 30 | 175 | 19 | 165 | NAC domain-containing protein 19 |
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