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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Itr_sc004286.1_g00004.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
NF-YB |
Protein Properties |
Length: 169aa MW: 19144.5 Da PI: 4.8229 |
Description |
NF-YB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc004286.1_g00004.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YB | 173.4 | 2.3e-54 | 28 | 124 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvy 86
++eqdr+lPianv+rimkk+lP nakisk+ak t+qecvsefisfvt+easdkcq+ekrkt+ngdd++wal++lGf+dy++plk y
Itr_sc004286.1_g00004.1 28 MKEQDRLLPIANVGRIMKKILPPNAKISKEAKLTMQECVSEFISFVTGEASDKCQKEKRKTVNGDDVCWALGSLGFDDYAAPLKRY 113
589*********************************************************************************** PP
NF-YB 87 lkkyrelegek 97
l++yre+ege+
Itr_sc004286.1_g00004.1 114 LHRYREMEGER 124
*********97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 169 aa
Download sequence Send
to blast |
MVDNIMQGFE YRSTGAGCSG TDGEDRVMKE QDRLLPIANV GRIMKKILPP NAKISKEAKL 60 TMQECVSEFI SFVTGEASDK CQKEKRKTVN GDDVCWALGS LGFDDYAAPL KRYLHRYREM 120 EGERANQSKS VVPGERSTDE REEDEEGAPI QFLPYTFPNQ QFHQVINID
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Functional Description ? help
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Source |
Description |
UniProt | Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. |