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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc003191.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
bHLH |
| Protein Properties |
Length: 299aa MW: 33693.4 Da PI: 6.5874 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc003191.1_g00002.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 32.7 | 1.3e-10 | 121 | 171 | 1 | 53 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53
+r+ h +Er+RR+++ + ++ Lr lP ++K s ++ + +Av+YI +
Itr_sc003191.1_g00002.1 121 KRVIHRDIERQRRQEMANLYASLRVQLPLeY---LKGKRSTSDHVMEAVNYIED 171
7999*************************77...9*****************86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MRMDNFHHQN PFFPSQQNNE DYSELFSAPH TTTQTHDENA PFLFHQQDPT LLQHQDLQFD 60
VGYLELDDPV AAAAALEVSN YPAPDNVNAA PRNKGKKKQQ KPWAAAGRGQ GESSASDGKQ 120
KRVIHRDIER QRRQEMANLY ASLRVQLPLE YLKGKRSTSD HVMEAVNYIE DKQKSIRELE 180
EKRDRLKRLG SSGSDVVEED YNRRTGNSSS SAAAPAMVTV QTCLDGVEIF INSGFPNQGF 240
RISRALDLLV QQGHHVLSCV CSRVDDRLLH TIRVQVSPQA GVDLQALQQN LSDSINQLY
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 120 | 132 | KRVIHRDIERQRR |
