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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Itr_sc003143.1_g00004.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
WOX |
| Protein Properties |
Length: 145aa MW: 16805.9 Da PI: 9.8623 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc003143.1_g00004.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.1 | 6.4e-18 | 10 | 70 | 3 | 57 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++++eql++L +l+++ r+ps++e+ ++++l +++e++V++WFqN++ +e++
Itr_sc003143.1_g00004.1 10 TRWNPKSEQLQILRDLYYNhgMRNPSRQEIMGITQRLsqygKIEEKNVFYWFQNQKGRERQ 70
8*****************8789************************************996 PP
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| 2 | Wus_type_Homeobox | 101.3 | 6.7e-33 | 9 | 71 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
+tRW+P++eQ++iL++ly+ +G+r+P+++ei it++L++yGkie+kNVfyWFQN+k Rerq+
Itr_sc003143.1_g00004.1 9 STRWNPKSEQLQILRDLYYnHGMRNPSRQEIMGITQRLSQYGKIEEKNVFYWFQNQKGRERQQ 71
79***************9769****************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 145 aa
Download sequence Send
to blast |
MDAEHIYVST RWNPKSEQLQ ILRDLYYNHG MRNPSRQEIM GITQRLSQYG KIEEKNVFYW 60
FQNQKGRERQ QRKRLATLAA EAATPHDLRQ QATVGGSSEH ATKHPMLETL PLFPMHSDRV 120
GKSKADTNNS EPSLELTLRP YSPTP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). May induce shoot stem cells activity in order to maintain the stem cell identity (By similarity). {ECO:0000250}. |
