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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc003068.1_g00004.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
ERF |
| Protein Properties |
Length: 204aa MW: 21891.7 Da PI: 9.0589 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc003068.1_g00004.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 58.3 | 1.8e-18 | 25 | 74 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr ++ +g++ AeIrd ++ ++r +lg+f +aeeAa+a++aa++kl+g
Itr_sc003068.1_g00004.1 25 KFRGVRKRS-WGKFSAEIRDpWK----KTRLWLGTFLSAEEAARAYDAAARKLNG 74
89****888.**********883....5*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 204 aa
Download sequence Send
to blast |
MARGRAAAAA AAGDAVGSGE LKEVKFRGVR KRSWGKFSAE IRDPWKKTRL WLGTFLSAEE 60
AARAYDAAAR KLNGPRVKTN FPPPPISQLP PYNQTAIPKN PLIGSLMISQ RPASSSMSST 120
VESFSGPRPP PPHTAATPNR RHPRSPPIAP DDCHSDCDSS SSVVDDGDCE NIASSSFRKP 180
LSFDLNLPPA MDDVCDLHST ALCL
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}. |
