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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Itr_sc002978.1_g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
Dof |
| Protein Properties |
Length: 279aa MW: 30012.7 Da PI: 8.8131 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc002978.1_g00001.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 120.4 | 6.7e-38 | 65 | 125 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+++al+cprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGg++r+n+k+s
Itr_sc002978.1_g00001.1 65 QDAALNCPRCESTNTKFCYFNNYSLTQPRHFCKSCRRYWTRGGALRNVPVGGACRRNNKRS 125
57789****************************************************9876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MVFGSIPAYL DPANWQQVQQ NHHTGICVPP SSQCSSAPVP APAQVGSIRP GSMAERARLA 60
NIPAQDAALN CPRCESTNTK FCYFNNYSLT QPRHFCKSCR RYWTRGGALR NVPVGGACRR 120
NNKRSNTKPP SNSTNNTPTS STSSPASTTL LGFLPPNFNL PPLLGAQLSD THFHGGEGIG 180
SILSGSAAVD PWRLQQASPR QMSLLGGLNP SSYGLYPFQD GSGTMLGQMG SNSVMKMEQG 240
NQESRLFSPW SQIFMIPASD EQWNCVADVS ANLNSSANM
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements. {ECO:0000269|PubMed:12887587}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By auxin and salicylic acid (SA). Repressed by jasmonic acid (JA). {ECO:0000269|PubMed:10758484, ECO:0000269|PubMed:12887587}. |
