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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Itr_sc002961.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
MYB_related |
Protein Properties |
Length: 272aa MW: 29801 Da PI: 9.0113 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc002961.1_g00003.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 44.1 | 4.9e-14 | 116 | 160 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+W++eE+ +++ + ++lG g+W+ I+r++ ++Rt+ q+ s+ qky
Itr_sc002961.1_g00003.1 116 PWSEEEHRIFLVGLEKLGRGDWRGISRHFVTTRTPTQIASHAQKY 160
8*******************************************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MTRKCSSCGK TGHNSRTCNN NNDDHHDQRT SSYGDSMKLF GVKLIGSQNS SSSYSFVMKK 60 SFSDDCLPAA SYSFVDSSFG SSGFLLDENF DDKVPACGYI SDGLDAGNRE KKRGVPWSEE 120 EHRIFLVGLE KLGRGDWRGI SRHFVTTRTP TQIASHAQKY FLRQNSLNSR KRRRSLFDLA 180 WKADESRVLC GKMAKSRSSS IIDFSSTTTS LSAIALSSGQ DSKSSQYSNI ISASSMSFAT 240 HNDNQNNIGV QSPSPPPSPD LELTLGGTIS VV
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 169 | 173 | RKRRR |
2 | 169 | 174 | RKRRRS |