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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc002928.1_g00001.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
WOX |
| Protein Properties |
Length: 267aa MW: 29204.7 Da PI: 8.4747 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc002928.1_g00001.1 | genome | Kazusa | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 49.2 | 9e-16 | 27 | 87 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+++++eq+ +Le+ F++ +p +ee ++ k l + +++V++WFqNrR + ++
Itr_sc002928.1_g00001.1 27 RSRWNPKPEQILILESIFNSgMVNPPKEETVRIRKLLekfgAVGDANVFYWFQNRRSRSRR 87
89*****************99*************************************997 PP
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| 2 | Wus_type_Homeobox | 107.3 | 9e-35 | 27 | 89 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
r+RW+P+peQi iLe++++sG+++P+kee+ ri++ Le++G+++d+NVfyWFQNr++R+r++q
Itr_sc002928.1_g00001.1 27 RSRWNPKPEQILILESIFNSGMVNPPKEETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQ 89
79***********************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 267 aa
Download sequence Send
to blast |
MEDYQDSSSS TSSPKKNNTP ERNEGVRSRW NPKPEQILIL ESIFNSGMVN PPKEETVRIR 60
KLLEKFGAVG DANVFYWFQN RRSRSRRRQR QLQLQATLGP PPATADHPQH AGAAAGVAIS 120
SCVFPPSSAS NSAVSSYFPN LLGSSSSSSS SPCCGGGVDD EMLCLSGGET MMSMNSAGIE 180
PAGSSITPSS LMSSHDASHL QYHQPVVLKR YYSCAERKLQ LHGTETIYPF CSSRRMTPAQ 240
LHFPFNITAV TVQYNCSISS TQLQYQP
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