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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Itr_sc002521.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
NAC |
| Protein Properties |
Length: 257aa MW: 29398.6 Da PI: 6.6028 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc002521.1_g00002.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 101.5 | 1.1e-31 | 37 | 117 | 50 | 129 |
NAM 50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
+k +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd++v++ +++ vg++ktLvfyk+rap+g kt W+mhe+rle
Itr_sc002521.1_g00002.1 37 VAKLNSSEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVIDPtTRAIVGMRKTLVFYKNRAPNGIKTGWIMHEFRLE 117
3445678**************************************966777***************************985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 257 aa
Download sequence Send
to blast |
MTYDDNLGQF FHCDPLSDRF TRKGLLNPRP RIVIEEVAKL NSSEWYFFSF RDRKYATGFR 60
TNRATTSGYW KATGKDRTVI DPTTRAIVGM RKTLVFYKNR APNGIKTGWI MHEFRLENPH 120
IPPKEDWVLC RVFHKSKTET NNEDNIMYDD IASGNLEVCL PSTAAYRPVA AAYSHSHSPP 180
NQTQTSSTAN FFTAAPADQR GFPQSSRHNT NVAPSSNDYE FLFDDMNFED HPSMQDGGVH 240
SSIEDMRFDD ENGLAFI
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-28 | 33 | 138 | 61 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-28 | 33 | 138 | 61 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-28 | 33 | 138 | 61 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-28 | 33 | 138 | 61 | 168 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 6e-28 | 33 | 138 | 64 | 171 | NAC domain-containing protein 19 |
| 3swm_B | 6e-28 | 33 | 138 | 64 | 171 | NAC domain-containing protein 19 |
| 3swm_C | 6e-28 | 33 | 138 | 64 | 171 | NAC domain-containing protein 19 |
| 3swm_D | 6e-28 | 33 | 138 | 64 | 171 | NAC domain-containing protein 19 |
| 3swp_A | 6e-28 | 33 | 138 | 64 | 171 | NAC domain-containing protein 19 |
| 3swp_B | 6e-28 | 33 | 138 | 64 | 171 | NAC domain-containing protein 19 |
| 3swp_C | 6e-28 | 33 | 138 | 64 | 171 | NAC domain-containing protein 19 |
| 3swp_D | 6e-28 | 33 | 138 | 64 | 171 | NAC domain-containing protein 19 |
| 4dul_A | 6e-28 | 33 | 138 | 61 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 6e-28 | 33 | 138 | 61 | 168 | NAC domain-containing protein 19 |
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