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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc002342.1_g00005.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
LBD |
| Protein Properties |
Length: 215aa MW: 23213.4 Da PI: 6.6053 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc002342.1_g00005.1 | genome | Kazusa | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 133.6 | 7.6e-42 | 39 | 138 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq 86
+CaaCk+lrr+Ca++Cvlapyfp ++p kf +h++FGasn++k+l++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q
Itr_sc002342.1_g00005.1 39 PCAACKILRRRCAEKCVLAPYFPPTDPIKFTTAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARLRDPVYGSAGAICHLQKQ 124
7************************************************************************************* PP
DUF260 87 leqlkaelallkee 100
+++l+a+la++++e
Itr_sc002342.1_g00005.1 125 VSELQAQLAQTQAE 138
*********99987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 215 aa
Download sequence Send
to blast |
MESSSCETTA TAVTPPSSRS VSPSSSSSPP PPSSLVVSPC AACKILRRRC AEKCVLAPYF 60
PPTDPIKFTT AHRVFGASNI IKFLQELPES QRADAVSSMV YEANARLRDP VYGSAGAICH 120
LQKQVSELQA QLAQTQAELL NMQCQLQAQA NHLMARVCME MPPPPPLLHQ QSGLFDSCGG 180
VTAATETAQH HGLLSTLDDN NFGHSFGWEL QTMWT
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